Insertion junction: CLIP2.062137_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062137
Chromosome:chromosome 3
Location:3963613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171250 (1 of 1) IPR000104//IPR011989//IPR012677//IPR013083 - Antifreeze protein, type I // Armadillo-like helical // Nucleotide-binding alpha-beta plait domain // Zinc finger, RING/FYVE/PHD-type 5'UTR
Cre03.g171300 GYX1 (1 of 1) 1.1.3.15 - (S)-2-hydroxy-acid oxidase / Hydroxy-acid oxidase B; Glycolate oxidase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACAGTTGATGCATGTGTGCGAGTCAGGATCGATTGGACAGTGTTTGAT
Internal bar code:ACTTTGGCTCACTCACTATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAACGAAACAGGCCTG
Suggested primer 2:AGCACTGAAGGCTCACAGAC