Insertion junction: CLIP2.062141_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062141
Chromosome:chromosome 2
Location:2516592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092150 CSL (1 of 1) PTHR23155//PTHR23155:SF444 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED; Chlamydomonas SHOC2/SUR8-like LRR 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGTATTCCACGCAGACTGAGATGGGAACGTGTATGGGGGGGATTGGT
Internal bar code:GGTTATATGCAAATTGTCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4353
LEAP-Seq percent confirming:96.5116
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAAGCCTTGCACGACTTG
Suggested primer 2:CATTCTCTATGGACGGCCCC