Insertion junction: CLIP2.062142_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062142
Chromosome:chromosome 12
Location:4907929
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524100 ABH1,CBP80 mRNA cap-binding protein; (1 of 1) K12882 - nuclear cap-binding protein subunit 1 (NCBP1, CBP80) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATTTAGCACTTAATGAAGCCAGCTGCGAACGTCAAGAACAAACTGCA
Internal bar code:ACAGGTCAGCCAGTTGTAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:212
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCCTACATTCCGTCAA
Suggested primer 2:CGCGCACACTTGAAACTGAA