Insertion junction: CLIP2.062148_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062148
Chromosome:chromosome 7
Location:6100381
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g355500 (1 of 2) PF03226 - Yippee zinc-binding/DNA-binding /Mis18, centromere assembly (Yippee-Mis18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGACGCACATTCTGGTTTGCATATGCGACGCTTTTTGTGGGGCGCTG
Internal bar code:ACGATCTAAGTGACAATCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCAGTACACGTCACACA
Suggested primer 2:GGATACAACCTACCGCTCGG