Insertion junction: CLIP2.062149_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062149
Chromosome:chromosome 16
Location:535680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692585 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCACACAGCAACTATTGCTTATTTCACCATTTGGAGCTCACAATAAT
Internal bar code:CATCACTTTCGTATTGTGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGTTCCCGCGTCCTACC
Suggested primer 2:CCCGTGTAGGCGAACTTGAT