Insertion junction: CLIP2.062149_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062149
Chromosome:chromosome 16
Location:535682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692585 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTTTACTTTTAACATGCTAGCTGAGATTTAAGACGGAAACTGGAAAG
Internal bar code:CATCACTTTCGTATTGTGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1687
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTGTAGGCGAACTTGAT
Suggested primer 2:CATAGTTCCCGCGTCCTACC