Insertion junction: CLIP2.062150_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062150
Chromosome:chromosome 2
Location:85868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g073650 PRP19 Spliceosome Component, nuclear pre-mRNA splicing factor; (1 of 1) K10599 - pre-mRNA-processing factor 19 (PRPF19, PRP19) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTGAGCTGTAACAACCGCTCAAGTCGCTACAACATACCCTGCAACCT
Internal bar code:GTGTTAAGTTTCACGTCGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2696
LEAP-Seq percent confirming:96.2264
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGCACGAGAGCTATCAG
Suggested primer 2:GCAAGGCTGTGAGTCCTCAT