Insertion junction: CLIP2.062153_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062153
Chromosome:chromosome 16
Location:276252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694250 (1 of 18) PF12937 - F-box-like (F-box-like) 5'UTR
Cre16.g694300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTATGTCAGGACCTTCTTTCCTGCATGTGGTACCTCGAGCACGATAA
Internal bar code:TATGACGTTTAGTCTAAGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:760
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGCAACGCGTGAGTGAC
Suggested primer 2:CTCACGCATACACGCACATG