Insertion junction: CLIP2.062165_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062165
Chromosome:chromosome 3
Location:3144221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164800 (1 of 1) PTHR24361:SF363 - PROTEIN KINASE-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTCAAGGCTGACCGGTAGCGGCAGGTGGCGTGCGCCGGTTCTGCCTG
Internal bar code:AGGGCCTAGTAGCGTGAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:925
LEAP-Seq percent confirming:77.0833
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGAGATTGTGTGCCGGAA
Suggested primer 2:TCGCCCTTTCGCTCTTTCAT