Insertion junction: CLIP2.062168_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062168
Chromosome:chromosome 3
Location:1671070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAATGATTGACCGGTTGCACTTGAATATGATGTTATAGGCGGCCCC
Internal bar code:AATCAACTTGGATACTTAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2137
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTATCCCAGGATGCGGGTTC
Suggested primer 2:GTTGACAAGTCGTTGGTGGC