Insertion junction: CLIP2.062176_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062176
Chromosome:chromosome 6
Location:4795188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279900 MOT14,VFL3 Variable Flagella Number 3; (1 of 1) K16755 - coiled-coil domain-containing protein 61 (CCDC61) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCTTTGAGATACAGTACCTGAAGCTACGTAGTGCTTTTTGGATAACC
Internal bar code:CCGAGTACTTCATCGGGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTATCAGACGCCTGCTTA
Suggested primer 2:GCTCGGAGCTAGCTGTACTG