Insertion junction: CLIP2.062178_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062178
Chromosome:chromosome 9
Location:3274403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394991 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATTCAGATCGGAATTGGTGAGGAAGGAACCCGAAATGTGCTGCGCTGC
Internal bar code:TTGCGGCTCAGAGGGAGAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:751
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGGTTCCTTGCATTGC
Suggested primer 2:GACTGGCCTACTCGCTCATC