Insertion junction: CLIP2.062178_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062178
Chromosome:chromosome 9
Location:3274407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394991 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCTGATCCCATGTCCTATGCCCTATCTTCGGCACAGGAGCCAACTGC
Internal bar code:TTGCGGCTCAGAGGGAGAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1285
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGCCTACTCGCTCATC
Suggested primer 2:TTGCTGGTTCCTTGCATTGC