Insertion junction: CLIP2.062183_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062183
Chromosome:chromosome 11
Location:1961417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467778 (1 of 1) K00761 - uracil phosphoribosyltransferase (upp, UPRT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAACCCTCCACCTCCACACACACGAAGCTACCGGGCAGCTGCCAGCA
Internal bar code:GAACGGGTTAGTATGTGGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCTACTTGCCCTCTCC
Suggested primer 2:CGTATCCCACTCATCACCCG