Insertion junction: CLIP2.062187_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062187
Chromosome:chromosome 5
Location:1115939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248200 (1 of 2) PTHR21493//PTHR21493:SF124 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGGGGCGAGTCAGCGCCTCGCCCTGCCACCGCAACATTTCAAGCCGC
Internal bar code:GGTGTAAATTTTTCGGCTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1520
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGAACGGTAGCGAACA
Suggested primer 2:AGCAGGAACACGTGACAGAG