Insertion junction: CLIP2.062195_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062195
Chromosome:chromosome 1
Location:3196251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020350 SDH3 Succinate dehydrogenase subunit b560; (1 of 1) K00236 - succinate dehydrogenase (ubiquinone) cytochrome b560 subunit (SDHC, SDH3) 3'UTR
Cre01.g020400 (1 of 1) K13111 - WD40 repeat-containing protein SMU1 (SMU1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGTTGTACAGCCCCGGATTGGCTGCTGCGCTACGTCATTGTCGCTCG
Internal bar code:GAAGTATGTTAGTCTGTTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3075
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGTAGCAGCCGAGTAGA
Suggested primer 2:AAGCTGGAGCACGTCATGAA