Insertion junction: CLIP2.062198_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062198
Chromosome:chromosome 5
Location:712872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245350 (1 of 1) IPR003582//IPR009011 - ShKT domain // Mannose-6-phosphate receptor binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCAGCACTGGCCAAGTCAAGAGAAGCAGCACGCATTGCCCGCGCAT
Internal bar code:CAGACCGCTAGTGAGCATTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1326
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGCGGGCTTTCTTTTA
Suggested primer 2:AACCCAGCCCCATACATGTG