Insertion junction: CLIP2.062200_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062200
Chromosome:chromosome 5
Location:2215360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237750 (1 of 1) PF03980 - Nnf1 (Nnf1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTAATGTTGTGCCCTAGCTAGCGGCCAGAGGCGAGAGAAGGCACTCG
Internal bar code:CGCATGATGTATCTAAGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACAGGAAGTGCGAGGAG
Suggested primer 2:TGCGAATGAGTCCTGCTTGT