Insertion junction: CLIP2.062201_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062201
Chromosome:chromosome 12
Location:1601316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487101 CSV9 Chlamydomonas-specific family protein; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCATTCGTAGCTGTGGGTCCATCGCTGCATTCGACATCAGACCAGC
Internal bar code:CCCTATCAAGCACGCTCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3593
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCTGTTGTGTCAATTGT
Suggested primer 2:CGACAACGTCCCAAACAACC