Insertion junction: CLIP2.062205_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062205
Chromosome:chromosome 3
Location:5739414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187250 (1 of 1) PF05514 - HR-like lesion-inducing (HR_lesion) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCAGCTCTTACCATCTTCCCCGCATCGTTCTGGGAGAAGCCATGCA
Internal bar code:AAACTCCGGTAAGGCTCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4464
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCATACTGACGCTTGC
Suggested primer 2:CTGTCCAAGTGCGGTGTTTG