Insertion junction: CLIP2.062210_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062210
Chromosome:chromosome 12
Location:7001036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560700 MDJ1B,CDJ6 (1 of 2) PTHR24078//PTHR24078:SF290 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; Mitochondrial DnaJ-like protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATCAAACACGTGACCGCCTTCCACCACTCTCTCAACCGTGACATCCG
Internal bar code:TTAAATTTCTCAGGTATGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5632
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTGCACGGAACCCAGAC
Suggested primer 2:TTGGCCTGTGGGGATCAATC