Insertion junction: CLIP2.062214_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062214
Chromosome:chromosome 7
Location:3924371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339350 (1 of 1) K14050 - geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60] (RABGGTA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCAAGGCATCTTCGCTAAGGGTGTTGGTGTGCGGCCTGGGAATACA
Internal bar code:GCTAGAATTACTTTCAGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTATTGCTTGCATGCTGC
Suggested primer 2:ATGGGGCTGGGTGTTTTAGG