Insertion junction: CLIP2.062216_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062216
Chromosome:chromosome 8
Location:2016128
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g368650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGTGCCAAAACGGTCAGCGGGTCAACCCAACCACCTCCGCGTTGACT
Internal bar code:GCCGCCGGATAGACTATATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2119
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAGCAGTTCACAAGCAC
Suggested primer 2:CAACGAAAGCACCCACCTTG