Insertion junction: CLIP2.062219_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062219
Chromosome:chromosome 6
Location:7963978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800746 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAATACATAGGAGCGCTCAGCGTTCTGGTTTGGGAGCGCTTAAACAG
Internal bar code:TCAATGAATAATCGCACTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGCACGTCAACATAGG
Suggested primer 2:GGCCTTGAACAGCATCAGGA