Insertion junction: CLIP2.062220_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062220
Chromosome:chromosome 1
Location:7639919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g053550 (1 of 19) IPR000225//IPR016024 - Armadillo // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATGCTTCATGCCAGCGGTACAATACTGACAGACCACCCCTGTGACGG
Internal bar code:GACCCTTCCACGAGAGCCTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5595
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTCGTCACACAAGTCGG
Suggested primer 2:CACGTGGAGGAGGATAGCAC