Insertion junction: CLIP2.062224_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062224
Chromosome:chromosome 9
Location:4573822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401330 (1 of 1) 3.1.3.21 - Glycerol-1-phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGATACAAGAGGTACCTGACTATTGTTTGCAGCGACGGACGGTCAC
Internal bar code:CGGCGAGTCTGAGCCGCGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2302
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCGTTCTTCACATCCT
Suggested primer 2:CATGCGGCTTTACATGTGGG