Insertion junction: CLIP2.062227_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062227
Chromosome:chromosome 12
Location:8646140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548050 CYG32 (1 of 70) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase 3'UTR
Cre12.g548100 UBC7 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT); Putative Ubiquitin-protein ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTTATGAAACCACCTGACACACAGAGTGCCACTGCGCGCCAATCAGT
Internal bar code:TAGGGGTGGATTACGGACTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4618
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:145
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:145

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTGCTGGTTGCTGGTTG
Suggested primer 2:AGTGTCATGGTCACGCACAT