Insertion junction: CLIP2.062228_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062228
Chromosome:chromosome 6
Location:5018283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281766 (1 of 77) IPR001623 - DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGTACCTGACTGACAGGAGGCAGGGCCAACAAGCTTAACGAAGTGCT
Internal bar code:GAGTTCACGTTGGTATGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4972
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGCCCTATGCATTTTGC
Suggested primer 2:CTTGTTGTGTGCCACCCATG