Insertion junction: CLIP2.062228_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062228
Chromosome:chromosome 6
Location:5018284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281766 (1 of 77) IPR001623 - DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGGGGCTGGCTTCTGTGTACACAGCACCCTCCCACTATGAATGACAG
Internal bar code:GAGTTCACGTTGGTATGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTGTGTGCCACCCATG
Suggested primer 2:CTCGGCCCTATGCATTTTGC