Insertion junction: CLIP2.062236_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062236
Chromosome:chromosome 8
Location:2233607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370350 (1 of 6) PF09409 - PUB domain (PUB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGAACCTGGAGGTCCTGCCGGGGCCGAGCAGTCCTGCGTGCTAGCGG
Internal bar code:ATTATAAATTAAGTCCTATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4752
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATTCCTGGACCCCTTGC
Suggested primer 2:CAGAGTTACACGGGGTGGAC