Insertion junction: CLIP2.062238_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062238
Chromosome:chromosome 7
Location:5108324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348040 (1 of 4) PTHR11785//PTHR11785:SF367 - AMINO ACID TRANSPORTER // AMINO-ACID PERMEASE BAT1; Probable amino acid/metabolite permease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACATGTGTGTGCACATGAGGTAACCTGCGCGGCTGGGCTGCACCTG
Internal bar code:TTCTTGTGGTGGAAGCATCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1695
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCCCCGAGTGCTTATT
Suggested primer 2:CGTCATGTGATTGCTCTGCG