Insertion junction: CLIP2.062239_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062239
Chromosome:chromosome 5
Location:2074981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800551 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGGTGGATGCTTGGGGTTGTGTAGGCACCAGGGCTCTGACGCAGGTT
Internal bar code:TGACCACCGGTCTCCGGAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1601
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTAACCGCTGGGAGTTG
Suggested primer 2:TAGGGCTTGCGTGTTTTTGC