Insertion junction: CLIP2.062254_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062254
Chromosome:chromosome 13
Location:4808481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604850 (1 of 1) IPR026126 - BRISC and BRCA1-A complex member 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAATCAAGTGCCTTATTGAGAATGCAATATCTATTTAGGTAGCCAAG
Internal bar code:CACGATATCCATCGACATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCAACCCCCAAATTTGC
Suggested primer 2:CTTCCGCCCTTCTAGCAACA