Insertion junction: CLIP2.062260_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062260
Chromosome:chromosome 10
Location:4224753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449350 (1 of 1) PTHR11717//PTHR11717:SF2 - LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE // PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGAGGTTGTCTGCGAGTGCGTGTTTGTGATTGCGGCTGTGCTTGGCA
Internal bar code:AGGCTTTGCTCTAGTTCTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1730
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCTCGTTTGGCTGTCCA
Suggested primer 2:TACAAGGACGAGCCCGAAAC