Insertion junction: CLIP2.062261_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062261
Chromosome:chromosome 16
Location:2632710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661350 RBCMT1,RMT1 (1 of 1) K00592 - [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase (E2.1.1.127); ribulose-1%252C5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative 3'UTR
Cre16.g661400 (1 of 1) PTHR22979 - ZINC FINGER PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCTCCCTCGGTCGGCGCCCGCCGCATCTCTGAAATCCTGATCTACAT
Internal bar code:TGCTTTGCTTATGAGCCCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1164
LEAP-Seq percent confirming:80.5556
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACGACGGTAAGTGTGTG
Suggested primer 2:GGTGGGCTCTAGCTGTTTGT