Insertion junction: CLIP2.062266_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062266
Chromosome:chromosome 1
Location:6675427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047500 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGTGGCCTAGGGATGAGCAGCACGGAACCACGGGTGCACCGATACGT
Internal bar code:ATTGAACGATACAAGTTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATGTAACGGAGCATTG
Suggested primer 2:ACACGAAACGACTTCTCCCC