Insertion junction: CLIP2.062268_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062268
Chromosome:chromosome 15
Location:1246236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g638450 RAP13,OPR78,NCL26 Nuclear Control of chloroplast Like 26 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCTAGGTGGGCGGCGCGTGTCTACAGGTAGGGTAGGAGGTAGGAAA
Internal bar code:GTAGAAAAACGTGCGACTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2213
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTCTCCAGTTGTTCTCT
Suggested primer 2:CGGTTGGACAGGTGCTTTTG