Insertion junction: CLIP2.062288_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062288
Chromosome:chromosome 12
Location:9507877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTCAAAAGTGAAAGCACAAGAGTACAAGAGACGGTGGCCCGCACTTC
Internal bar code:TCTGGTTGCGGATCGTTATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1624
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCCCGCTTCTTGCTCAG
Suggested primer 2:CTTTGAAGCAGCAGCAGCAA