Insertion junction: CLIP2.062291_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062291
Chromosome:chromosome 6
Location:5350400
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g285001 (1 of 1) PTHR34180//PTHR34180:SF1 - FAMILY NOT NAMED // MUTANT TAN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGACAAAGGATCCCGAGGATTCCGGCTCACAGCCCTGTGGCCCCTGA
Internal bar code:GGGTAGCAGTGCCGAGGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTTGCAACTCTCAGGG
Suggested primer 2:TGAGCACGAAGGAAGGAACC