Insertion junction: CLIP2.062308_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062308
Chromosome:chromosome 7
Location:542591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain 5'UTR
Cre07.g800770 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTACGTAAAAGGGTATTGCCTTTCATCGCTGATGCATTTCCGATAACA
Internal bar code:GGGTAGAGCCTAGAAAGCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2617
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCATATCCCTGGGCCATC
Suggested primer 2:TCATCACAGGAACACGGGTG