Insertion junction: CLIP2.062319_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062319
Chromosome:chromosome 7
Location:1147751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320850 (1 of 2) 3.2.1.21 - Beta-glucosidase / Gentobiase 3'UTR
Cre07.g320900 (1 of 1) PTHR20883//PTHR20883:SF5 - PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTATGCCATACTAAGCAAACAAGCACGTTGCCTTGTAGCTCTGCGGCG
Internal bar code:AGTTGACCAGCCTGTACTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5650
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:133
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:133

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGTGGTGTGTCTCCTG
Suggested primer 2:GATTGGGCGCATGACGTTAC