Insertion junction: CLIP2.062319_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062319
Chromosome:chromosome 7
Location:1147752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320850 (1 of 2) 3.2.1.21 - Beta-glucosidase / Gentobiase 3'UTR
Cre07.g320900 (1 of 1) PTHR20883//PTHR20883:SF5 - PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCGGAGTTGCGCTATCGCCATGCAACATACATAATAAGTCCTGAATT
Internal bar code:AGTTGACCAGCCTGTACTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2368
LEAP-Seq percent confirming:98.4375
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGGGCGCATGACGTTAC
Suggested primer 2:GTACGGTGGTGTGTCTCCTG