Insertion junction: CLIP2.062326_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062326
Chromosome:chromosome 13
Location:4830153
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605000 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCCCTACCGTTCCAGCCCCTATTAAACCGATTGGTATGGGGGCGGT
Internal bar code:TTTCTTGATCGCTACGTTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1193
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGTCTTGCTCTCCTGG
Suggested primer 2:GCATCAATCAAGCAGGCGAG