Insertion junction: CLIP2.062333_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062333
Chromosome:chromosome 9
Location:3313172
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g395288 NHA1 (1 of 1) PTHR10283:SF103 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MLD14-RELATED; Sodium ion/proton transporter protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCTGTGTGTGCGGCAGCGTGCGCCCCAAGCCAGAAGCAGACCCACCC
Internal bar code:ACTACTGTATGAACTCTTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGCGTGTGTGTGTAC
Suggested primer 2:TTCACTACACCGGCTGTCAC