Insertion junction: CLIP2.062335_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062335
Chromosome:chromosome 12
Location:2932481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502400 (1 of 1) PTHR23423:SF17 - PROTEIN F40E10.6 3'UTR
Cre12.g502450 ELG8 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCATATGGCTCTTGAAAGGCTCCAAGCATTACTGCCAGAAGCTCAGAA
Internal bar code:GGGGGGTGAAGTTACCACAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:966
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGCTCCATGAGTCTGT
Suggested primer 2:TGCGTATCTTGGTGTGCCAT