Insertion junction: CLIP2.062337_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062337
Chromosome:chromosome 2
Location:3047952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTATCTACGGCCGTGTCCTGCTGGCACCGTGGGGGCACACCAAGATAG
Internal bar code:CTGCTTAAGATGGAGCGCGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2975
LEAP-Seq percent confirming:78.3784
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTACCGATACGCAACGC
Suggested primer 2:CCCTCCCGCGTACTAGACTA