Insertion junction: CLIP2.062338_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062338
Chromosome:chromosome 8
Location:2299666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370850 UBC18,RCE1 RUB1/NEDD8 E2 conjugating enzyme; (1 of 1) K10579 - ubiquitin-conjugating enzyme E2 M (UBE2M, UBC12) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGTTTGGGCCCCAGGGGGGATTTCTTAGGTAGCTGAGCGAACAGAC
Internal bar code:GACAGTCGTCGAATCTCGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2214
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TAGATCCACAGATGGCCCCA
Suggested primer 2:GTCCCGTATAGGCAGTGAGC