Insertion junction: CLIP2.062342_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062342
Chromosome:chromosome 10
Location:3838845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g445900 (1 of 1) PF00226//PF14901 - DnaJ domain (DnaJ) // Cleavage inducing molecular chaperone (Jiv90) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTTCGTACCCCCCCCCTGGTCGCGCGCTTGCGAGCGCATGCACCGCC
Internal bar code:GAGTGGTAAGTGCCAATAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3027
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTCACAGCCACATAATG
Suggested primer 2:GTAGGCGGTGGGTGAAGATG