Insertion junction: CLIP2.062346_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062346
Chromosome:chromosome 6
Location:5735005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288500 RRA2 (1 of 3) PTHR10994//PTHR10994:SF3 - RETICULON // ARABINOSYLTRANSFERASE; Reduced residual arabinose 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCCCATTCGATGCCCTCCACCCCGTCAGGCCGCACTCCTAGCACTCA
Internal bar code:ACCGTGTCTCTGATCCGATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2919
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATGAACTCCGGCCTCT
Suggested primer 2:CACGCCCCAATTTTTCCCAG