Insertion junction: CLIP2.062357_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062357
Chromosome:chromosome 2
Location:8023764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144802 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGACCTGACTGGCCCCCGGGATAAAAGTTAAAAACATAAACCAGCC
Internal bar code:TCACGTCTATTGACAATCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3511
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCGCTACACTTTGCAAA
Suggested primer 2:GGCTGTTGACAACTGTGCTG